PIA 1.0.1 – Protein Inference Algorithms

PIA 1.0.1

:: DESCRIPTION

PIA is a toolbox for MS based protein inference and identification analysis.

::DEVELOPER

Medizinisches Proteom-Center, Medical Bioinformatics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 PIA

:: MORE INFORMATION

Citation

PIA: An Intuitive Protein Inference Engine with a Web-Based User Interface.
Uszkoreit J, Maerkens A, Perez-Riverol Y, Meyer HE, Marcus K, Stephan C, Kohlbacher O, Eisenacher M.
J Proteome Res. 2015 Jul 2;14(7):2988-97. doi: 10.1021/acs.jproteome.5b00121

BPandP 3.1 – Bayesian MCMC algorithms for the analysis of Phylogeographic DNA data

BPandP 3.1

:: DESCRIPTION

BPP is an ANSI C program which implements Bayesian Markov chain Monte Carlo (MCMC) algorithms for analysis of phylogeographic data, that is, sequence alignments from multiple loci and multiple closely-related species.

::DEVELOPER

Ziheng Yang

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / MacOsX / Linux

:: DOWNLOAD

 BPP

:: MORE INFORMATION

RProteinInteraction 0.1-2 – Protein Interaction Network based protein Function Prediction algorithms

RProteinInteraction 0.1-2

:: DESCRIPTION

RProteinInteraction is a suite of protein interaction network based protein function prediction algorithms for R

::DEVELOPER

Brendan Sheehan <brendan.sheehan@ucd.ie>

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows /Mac OsX
  • R package

:: DOWNLOAD

 RProteinInteraction

:: MORE INFORMATION