P_ACT 1.2 – P-values: Adjustment for Correlated Tests

P_ACT 1.2

:: DESCRIPTION

p_ACT (P-values: Adjustment for Correlated Tests) is an R program that adjusts sets of up to 500 p-values from association tests between correlated traits and SNPs for multiple testing, accounting for the correlation between tests.

::DEVELOPER

Center for Statistical Genetics, University of Michigan

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 P_ACT

:: MORE INFORMATION

Citation

Conneely, K.N. and Boehnke, M. (2007)
So many correlated tests, so little time! Rapid adjustment of p-values for multiple correlated tests.
American Journal of Human Genetics 81:1158-1168.

DWD – Perform Systematic Bias Adjustment in microarray data.

DWD

:: DESCRIPTION

DWD (Distance Weighted Discrimination) can perform systematic bias adjustment in microarray data.

::DEVELOPER

Dr. J. S. Marron in the Department of Statistics at University of North Carolina at Chapel Hill.

:: SCREENSHOTS

::REQUIREMENTS

:: DOWNLOAD

 DWD

:: MORE INFORMATION

Citation

Adjustment of Systematic Microarray Data Biases.
M. Benito, J. Parker, Q. Du, J. Wu, D. Xiang, C. Perou, J. Marron
Bioinformatics 20:105-144, 2004