metaRNAmodules 1.0.2 – Automated RNA 3D Module Extraction and Modeling

metaRNAmodules 1.0.2

:: DESCRIPTION

metaRNAmodules is a pipeline which completely automates extracting putative FR3D modules and mapping of such modules to Rfam alignments to obtain comparative evidence.

::DEVELOPER

Center for non-coding RNA in Technology and Health (RTH)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

  metaRNAmodules

:: MORE INFORMATION

Citation:

Nucleic Acids Res. 2013 Dec;41(22):9999-10009. doi: 10.1093/nar/gkt795.
Automated identification of RNA 3D modules with discriminative power in RNA structural alignments.
Theis C, Höner Zu Siederdissen C, Hofacker IL, Gorodkin J.

ActiveICM 1.2-4 – PowerPoint & Web Browsers Plugin to Display 3D Modules

ActiveICM 1.2-4

:: DESCRIPTION

ActiveICM create 3D molecular documents for the web and PowerPoint. ActiveICM enables you to view and display 3D ICM graphical slides and animations interactively inside Microsoft PowerPoint and web browsers such as Internet Exporler and Mozilla Firefox. The files can be prepared and saved in ICM Browser Pro or ICM Pro.

Inside a single file you can save and display many different data types such as sequences, alignments, plots, tables, protein and DNA/RNA structures. Each data element can be linked to one another and annotated and then shared via the web, MS Office tools or in the free ICM-Browser. Pharmaceutical and biotech companies use ActiveICM to share data between scientists in different disciplines. Academic laboratories such as the SGC publish their data to the world using ActiveICM in a web browser.

::DEVELOPER

Molsoft LLC.

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows/Linux/Mac OS X
  • PowerPoint
  • IE / Firefox / Chrome / Safari

:: DOWNLOAD

ActiveICM

:: MORE INFORMATION