2D
- JChemPaint 3.3-1210 – Editor for 2D Molecular Structures
- Zem 0.3 – 2D Molecular Editor
- GSA Image Analyser 3.8.7 – 2D Images Analysis
- Seg2Dgel 0.5.12 – 2D Electrophoresis Gel Spot Segmenter
- JVirGel 2.2.3 – Create Virtual 2D Pretein Gel
- Flicker 0.87.2 – Compare 2D Gel Images
- PrestoPlot 1.23 – 2D Plotting tool
- Paris 2.0 – Manage and Analyse Data from 2D Electrophoresis Proteomic Image
- Melanie 7.0 – 2D Gel Analysis Platform
- ChemicPen 2.6 – Draw 2D Chemical Formulae & Reactions
- top2maya – View 2D Atomic Force microscope Images as 3D Objects
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