16S rRNA
- 16S classifier – Fast and Accurate Taxonomic Classification of 16S rRNA Sequences
- Tax4Fun 0.3.1 – Predicting Functional Profiles from Metagenomic 16S rRNA data
- CATCh v1 – Ensemble Classifier for Chimera Detection in 16S rRNA Sequencing Studies
- IPED v1 – Sequencing Error Correction in 16S rRNA Illmina paired-end Sequencing Reads
- MSClust 20130708 – Clustering 16S rRNA sequences into OTUs
- ESPRIT 201102 – Estimating Species Richness Using Large Collections of 16S rRNA Pyrosequences
- TreeLign 20100322 – Automatic update of 16s rRNA Phylogenetic Tree and Multiple Sequence Alignment in Metagenomics
- AbundantOTU+ 0.92b – Identification and Quantification of Abundant Species from Pyrosequences of 16S rRNA
- OrientationChecker 1.0 – Check Orientation of 16S rRNA Gene Sequences
- Pintail 1.1 – Analyse 16S rRNA Chimera & Anomalies
- Mallard 1.02 – Screen 16S rRNA Clone Libraries contain Chimeras
- PHYLOSHOP 1.01 – Predicts 16S rRNA Gene Fragments in Metagenomes
- DySC 20120601 – Software for Greedy Clustering of 16S rRNA Reads
- CROP 1.33 – Clustering 16S rRNA For OTU Prediction
- AmosCmp16Spipeline 20090918 – Assemble 16S rRNA Sequencing Reads