tacg is a command-line program that performs many of the common routines in pattern matching in biological strings. It was originally designed for restriction enzyme analysis and while that still forms a core of the program, it has been expanded to fill more roles, sort of a ‘grep’ for DNA.
Harry Mangalam <email@example.com>
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tacg–a grep for DNA.
BMC Bioinformatics. 2002;3:8. Epub 2002 Mar 6.