Apr 122014
 

SymmRef

:: DESCRIPTION

SymmRef is a method for refinement and re-ranking of symmetric docking solutions, with Cn symmetry. The method models backbone and side-chain movements and optimizes the rigid-body orientations of the monomers. The backbone movements are modeled by normal modes minimization and the conformations of the side-chains are modeled by selecting optimal rotamers.

::DEVELOPER

 the BioInfo3D group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

  SymmRef

:: MORE INFORMATION

Citation:

Efrat Mashiach-Farkash, Ruth Nussinov and Haim J. Wolfson.
SymmRef: A flexible refinement method for symmetric multimers .
Proteins: Structure, Function, and Bioinformatics Volume 79, Issue 9, pages 2607–2623, September 2011

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