swDMR is a free software using a sliding-window approach to identify differentially methylated regions (DMR) from whole-genome bisulfite sequencing. It is suitable for single base resolution methylation dataset through methylC-seq, BS-seq or RRBS technology.
Xianfeng Li (firstname.lastname@example.org), Institute of Genomic Medicine, Wenzhou Medical College, , China
- Windows / MacOsX / Linux
- R package
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swDMR: A Sliding Window Approach to Identify Differentially Methylated Regions Based on Whole Genome Bisulfite Sequencing.
Wang Z, Li X, Jiang Y, Shao Q, Liu Q, Chen B, Huang D.
PLoS One. 2015 Jul 15;10(7):e0132866. doi: 10.1371/journal.pone.0132866.