SVMiner 1.0 – Structure Variation Detection tool

SVMiner 1.0

:: DESCRIPTION

SVMiner is a structure variation detection tool. IT not only provides a probability score for each candidate, but also predicts the heterozygosity of genomic deletions.

::DEVELOPER

Computational Biology lab @ Case (CBC)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • perl

:: DOWNLOAD

 SVMiner

:: MORE INFORMATION

Citation

PLoS One. 2012;7(12):e52881. doi: 10.1371/journal.pone.0052881. Epub 2012 Dec 27.
A model-based clustering method for genomic structural variant prediction and genotyping using paired-end sequencing data.
Hayes M1, Pyon YS, Li J.