SubGSE is developed for gene set enrichment analysis.The primary objective of this program is to measure the enrichment of differentially expressed or phenotype associated genes in given gene sets. The input for the program includes the gene expression data of several samples with corresponding phenotypic data (categorical or continuous), and several given gene sets. The program will assess the significance of the enrichment of genes, whose gene expression profiles are associated with the phenotypic data, in each given gene set.
- Windows / Linux
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Xiting Yan and Fengzhu Sun
Testing gene set enrichment for subset of genes: Sub-GSE
BMC Bioinformatics 2008, 9:362