StructHDP is a program for automatically inferring the population structure and number of clusters from a sample of admixed genotype data. It extends the model used by Structure to allow for a potentially infinite number of populations and then chooses the number of populations that best explain the data.
the SAILING lab (the Laboratory of Statistical Artificial InteLligence and INtegrative Genomics)
- Linux / Windows / MacOsX
- C++ Compiler
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StructHDP: automatic inference of number of clusters and population structure from admixed genotype data Suyash Shringarpure;
Daegun Won; Eric P. Xing
Bioinformatics 2011 27: i324-i332