Aug 212015
 

stringgaussnet 1.1

:: DESCRIPTION

stringgaussnet is a toolbox for a construction of protein-protein interaction networks through the ‘STRING’ application programming interface, and an inference of Gaussian networks through ‘SIMoNe’ and ‘WGCNA’ approach, from DE genes analysis results and expression data. Additional functions are provided to import automatically networks into an active ‘Cytoscape’ session.

::DEVELOPER

Emmanuel Chaplais <emmanuel.chaplais at inserm.fr>, Henri-Jean Garchon

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux/ MacOsX
  • R

:: DOWNLOAD

 stringgaussnet

:: MORE INFORMATION

Citation

stringgaussnet: from differentially expressed genes to semantic and gaussian networks generation.
Chaplais E, Garchon HJ.
Bioinformatics. 2015 Jul 30. pii: btv450.

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