STAMP is a newly developed web server that is designed to support the study of DNA-binding motifs. STAMP may be used to query motifs against databases of known motifs; the software aligns input motifs against the chosen database (or alternatively against a user-provided dataset), and lists of the highest-scoring matches are returned. Such similarity-search functionality is expected to facilitate the identification of transcription factors that potentially interact with newly discovered motifs.
:: MORE INFORMATION
S Mahony, PV Benos,
“STAMP: a web tool for exploring DNA-binding motif similarities“,
Nucleic Acids Research (2007) 35(Web Server issue):W253-W258.