Dec 162012
 

SSHscreen 2.0.1

:: DESCRIPTION

SSHscreen is the R software package for screening forward and reverse cDNA libraries enriched for cowpea drought response genes microarrays,  (i) to normalize the data effectively using spike-in control spot normalization, and (ii) to select clones for sequencing based on the calculation of enrichment ratios with associated statistics.

::DEVELOPER

the Bioinformatics and Computational Biology Unit at the University of Pretoria

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux
  • R package

:: DOWNLOAD

 SSHscreen

:: MORE INFORMATION

Citation

Coetzer N, Gazendam I, Oelofse D, Berger DK (2010)
SSHscreen and SSHdb, generic software for microarray based gene discovery: application to the stress response in cowpea.
Plant Methods 6: 10.

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