SpliCQ 1.0 – Predict Alternative Splicing Events in Next Generation Sequencing data

SpliCQ 1.0

:: DESCRIPTION

SpliCQ can be used to analyse next generation sequencing reads for the expression of alternative splice variants by scoring the observations (reads) with known gene models (expectations) and novel gene models predicted based on the observations. Therefore the score allows to identify the most likely expressed isoforms in a tissue or cell line.

::DEVELOPER

Dr. Fabian Birzele

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/MacOsX
  • Java

:: DOWNLOAD

 SpliCQ

:: MORE INFORMATION