SplicingCompass predicts genes that are differentially spliced between two different conditions using RNA-seq data. The software is based on geometric angles between high dimensional read count vectors and is able to predict genes that undergo differential splicing from next generation RNA sequencing data.
- R package
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Bioinformatics. 2013 May 1;29(9):1141-8. doi: 10.1093/bioinformatics/btt101. Epub 2013 Feb 28.
SplicingCompass: differential splicing detection using RNA-seq data.
Aschoff M, Hotz-Wagenblatt A, Glatting KH, Fischer M, Eils R, König R.