Nov 212013
 

SPANNER 1.0.0

:: DESCRIPTION

SPANNER (Simularity Profile ANNotatER) extends LCA to perform supervised homology-based taxonomic classification of metagenomic fragments.

::DEVELOPER

Beiko lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /MacOsX
  • C++ Compiler
  • Python

:: DOWNLOAD

 SPANNER

:: MORE INFORMATION

Citation

Bioinformatics. 2013 Aug 1;29(15):1858-64. doi: 10.1093/bioinformatics/btt313.
SPANNER: taxonomic assignment of sequences using pyramid matching of similarity profiles.
Porter MS, Beiko RG.

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