SNPTools is a suite of tools that enables integrative SNP analysis in next generation sequencing data with large cohorts. It not only calls SNP in a population with high sensitivity and accuracy, but also employs a novel imputation engine to achieve highly accurate genotype calls in an efficient way.
Human Genome Sequencing Center, Baylor College of Medicine
- C++ compiler
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Genome Res. 2013 Jan 7. [Epub ahead of print]
An integrative variant analysis pipeline for accurate genotype/haplotype inference in population NGS data.
Wang Y, Lu J, Yu J, Gibbs RA, Yu F.