SNPLS (Sparse Network-regularized Partial Least Squares) is a package to integrate pairwise gene expression and drug response data as well as a gene interaction network for identifying joint gene-drug co-modules in a regression manner.
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Integrative analysis for identifying joint modular patterns of gene-expression and drug-response data.
Chen J, Zhang S.
Bioinformatics. 2016 Feb 1. pii: btw059