Jul 092013
 

SNP ratio test v3

:: DESCRIPTION

The SNP ratio test (SRT) can assess significance of enrichment of significant associations in genome-wide association studies. Tests can be applied to pathways such as KEGG/GO, or user-defined pathways to test specific hypotheses.

::DEVELOPER

Colm O’Dushlaine

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX / Windows
  • Perl
  • Plink

:: DOWNLOAD

 SNP ratio test

:: MORE INFORMATION

Citation

The SNP ratio test: pathway analysis of genome-wide association datasets.
O’Dushlaine C, Kenny E, Heron EA, Segurado R, Gill M, Morris DW, Corvin A.
Bioinformatics. 2009 Oct 15;25(20):2762-3. doi: 10.1093/bioinformatics/btp448. Epub 2009 Jul 20.

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