May 202016
 

Snippy 3.0

:: DESCRIPTION

Snippy finds SNPs between a haploid reference genome and your NGS sequence reads (handles reads >500bp long). It will find both substitutions and insertions/deletions (indels).

::DEVELOPER

Torsten Seemann <torsten.seemann@monash.edu>,Victorian Bioinformatics Consortium

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl
  • bwa mem
  • samtools
  • awk

:: DOWNLOAD

 Snippy

:: MORE INFORMATION

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