Apr 052015
 

SIMUPOP 1.1.4

:: DESCRIPTION

simuPOP is a general-purpose individual-based forward-time population genetics simulation environment. The core of simuPOP is a scripting language (Python) that provides a large number of objects and functions to manipulate populations, and a mechanism to evolve populations forward in time. Using this R/Splus-like environment, users can create, manipulate and evolve populations interactively, or write a script and run it as a batch file. Owing to its flexible and extensible design, simuPOP can simulate large and complex evolutionary processes with ease. At a more user-friendly level, simuPOP provides an increasing number of built-in scripts that perform simulations ranging from implementation of basic population genetics models to generating datasets under complex evolutionary scenarios.

::DEVELOPER

Bo Peng, Ph.D.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows  / Linux / MacOsX
  • Python

:: DOWNLOAD

 SIMUPOP

:: MORE INFORMATION

Citation

Bo Peng and Marek Kimmal (2005)
simuPOP: a forward-time population genetics simulation environment.
bioinformatics, 21(18): 3686-3687.

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