May 202014
 

SIMPLEX 2.0

:: DESCRIPTION

SIMPLEX is a cloud-enabled autonomous analysis pipeline, which comprises the complete exome analysis workflow. The pipeline combines several in-house developed and published applications to perform the following steps: (a) initial quality control, (b) intelligent data filtering and pre-processing, (c) sequence alignment to a reference genome, (d) SNP and DIP detection, (e) functional annotation of variants using different approaches, and (f) detailed report generation during various stages of the workflow.

::DEVELOPER

the Division of Bioinformatics, Innsbruck Medical University

:: SCREENSHOTS

 N/A

:: REQUIREMENTS

:: DOWNLOAD

 SIMPLEX

 :: MORE INFORMATION

Citation

SIMPLEX: cloud-enabled pipeline for the comprehensive analysis of exome sequencing data.
Fischer M, Snajder R, Pabinger S, Dander A, Schossig A, Zschocke J, Trajanoski Z, Stocker G.
PLoS One. 2012;7(8):e41948. doi: 10.1371/journal.pone.0041948.

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