May 082013
 

Sim4 20121010

:: DESCRIPTION

Sim4 is a similarity-based tool for aligning an expressed DNA sequence (EST, cDNA, mRNA) with a genomic sequence for the gene. It also detects end matches when the two input sequences overlap at one end (i.e., the start of one sequence overlaps the end of the other).

::DEVELOPER

Webb Miller’s lab at the Pennsylvania State University.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

  Sim4

:: MORE INFORMATION

Citation

Liliana Florea, George Hartzell, Zheng Zhang, Gerald M. Rubin, and Webb Miller
A Computer Program for Aligning a cDNA Sequence with a Genomic DNA Sequence
Genome Res. 1998. 8: 967-974

504 views

Sorry, the comment form is closed at this time.