Apr 292014
 

SHE-RA

:: DESCRIPTION

The SHERA software turns error-prone short reads into Sanger-quality composite reads by aligning the overlapping ends of each matepair. Given a library of appropriately-sized inserts, paired-end reads of each insert overlap in the middle, and can be aligned to produce a longer, more accurate composite read, extending the scope of applications for high throughput shortread sequencing.

::DEVELOPER

The Alm lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows / Linux / Mac OsX
  • Perl

:: DOWNLOAD

 SHE-RA

:: MORE INFORMATION

Citation

Rodrigue S, Materna AC, Timberlake SC, Blackburn MC, Malmstrom RR, et al. (2010)
Unlocking Short Read Sequencing for Metagenomics.
PLoS ONE 5(7): e11840. doi:10.1371/journal.pone.0011840

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