OligoWords calculates the various oligonucleotide usage statistical parameters seen in the Genome Browser.
SeqWord Viewer is a software to download to analyse your own genomes locally (with data from OligoWords). Results are displayed in a browser window.
SeqWord Sniffer was developed to do an automatic search in genomic DNA sequences for loci enriched with the horizontally transferred elements, fitness genes, giant genes, genes for ribosomal RNA and proteins.
Dr. Oleg Reva
- Windows / Linux / MacOsX
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BMC Bioinformatics. 2008 Aug 7;9:333. doi: 10.1186/1471-2105-9-333.
The SeqWord Genome Browser: an online tool for the identification and visualization of atypical regions of bacterial genomes through oligonucleotide usage.
Ganesan H, Rakitianskaia AS, Davenport CF, Tümmler B, Reva ON.