Sequgio 0.99.0 – Pre-processing of RNAseq data

Sequgio 0.99.0

:: DESCRIPTION

Sequgio provides an algorithm to estimate isoforms expression from RNA-seq data based on a model that doesn’t assume uniform distribution of count within transcripts.

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::DEVELOPER

Stefano Calza, Prof. Yudi Pawitan

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux /MacOsX
  • R package

:: DOWNLOAD

 Sequgio

 :: MORE INFORMATION

Citation

Bioinformatics. 2014 Feb 15;30(4):506-13. doi: 10.1093/bioinformatics/btt704. Epub 2013 Dec 3.
Joint estimation of isoform expression and isoform-specific read distribution using multisample RNA-Seq data.
Suo C1, Calza S, Salim A, Pawitan Y.