May 192014
 

SeqTrace 0.9.0

:: DESCRIPTION

SeqTrace is an application for viewing and processing DNA sequencing chromatograms (trace files). SeqTrace makes it easy to quickly generate high-quality finished sequences from a large number of trace files. SeqTrace can automatically identify, align, and compute consensus sequences from matching forward and reverse traces, filter low-quality base calls, and perform end trimming of finished sequences. The finished DNA sequences can then be exported to common sequence file formats, such as FASTA.

::DEVELOPER

Brian J. Stucky  stuckyb@colorado.edu , Guralnick Lab

:: SCREENSHOTS

SeqTrace 

:: REQUIREMENTS

  • Linux/ MacOsX/ Windows 
  • Python
  • PyGTK with the GTK+

:: DOWNLOAD

 SeqTrace

:: MORE INFORMATION

Citation

J Biomol Tech. 2012 Sep;23(3):90-3. doi: 10.7171/jbt.12-2303-004.
SeqTrace: a graphical tool for rapidly processing DNA sequencing chromatograms.
Stucky BJ.

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