SCOPE++ 20130523 – Sequence Classification Of homoPolymer Emissions

SCOPE++ 20130523

:: DESCRIPTION

SCOPE++(Sequence Classification Of homoPolymer Emissions) is a C++-based program for accurately identifying homopolymer in cDNA sequences using Hidden Markov Models. This can be extended to trimming poly(A)/poly(T) tails, or identifying A,C,G,T,or N homopolymer sequences.

::DEVELOPER

Liang Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C Compiler

:: DOWNLOAD

 SCOPE++

:: MORE INFORMATION

Citation

Genomics. 2014 Sep;104(3):157-62. doi: 10.1016/j.ygeno.2014.07.005
SCOPE++: sequence classification of homoPolymer emissions.
Morton JT, Abrudan P, Figueroa N, Liang C, Karro JE

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