Sep 202015
 

ScaffoldScaffolder 0.1

:: DESCRIPTION

ScaffoldScaffolder is a stand-alone scaffolding algorithm which was designed specifically for scaffolding diploid genomes.

::DEVELOPER

Computational Science Laboratory 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • JAVA

:: DOWNLOAD

 ScaffoldScaffolder

:: MORE INFORMATION

Citation:

BMC Bioinformatics. 2015;16 Suppl 7:S5. doi: 10.1186/1471-2105-16-S7-S5. Epub 2015 Apr 23.
Heterozygous genome assembly via binary classification of homologous sequence.
Bodily PM, Fujimoto M, Ortega C, Okuda N, Price JC, Clement MJ, Snell Q.

ScaffoldScaffolder: Solving Contig Orientation via Bidirected to Directed Graph Reduction.
Bodily PM, Fujimoto MS, Snell Q, Ventura D, Clement MJ.
Bioinformatics. 2015 Sep 17. pii: btv548.

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