Mar 142014
 

SABINE 1.2

:: DESCRIPTION

SABINE (Stand-alone binding specificity estimator) is a tool to predict the binding specificity of a transcription factor (TF), given its amino acid sequence, species, structural superclass and DNA-binding domains. For convenience, the superclass and DNA-binding domains of a given TF can be predicted based on sequence homology with TFs in the training of SABINE.

::DEVELOPER

the Center for Bioinformatics Tübingen (Zentrum für Bioinformatik Tübingen, ZBIT).

:: SCREENSHOTS

SABINE

:: REQUIREMENTS

  • Linux
  • Java

:: DOWNLOAD

  SABINE

:: MORE INFORMATION

Citation

PLoS One. 2013 Dec 12;8(12):e82238. doi: 10.1371/journal.pone.0082238. eCollection 2013.
TFpredict and SABINE: Sequence-Based Prediction of Structural and Functional Characteristics of Transcription Factors.
Eichner J, Topf F1, Dräger A, Wrzodek C, Wanke D, Zell A.

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