RUM 2.0.5_06 – Comparative Analysis of RNA-Seq Alignment Algorithms and the RNA-Seq Unified Mapper

RUM 2.0.5_06

:: DESCRIPTION

RUM (RNA-Seq Unified Mapper)  is an alignment, junction calling, and feature quantification pipeline specifically designed for Illumina RNA-Seq data.

::DEVELOPER

the Computational Biology and Informatics Laboratory at the University of Pennsylvania

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX
  • Perl

:: DOWNLOAD

 RUM

:: MORE INFORMATION

Citation:

Gregory R. Grant, Michael H. Farkas, Angel Pizarro, Nicholas Lahens, Jonathan Schug, Brian Brunk, Christian J. Stoeckert Jr, John B. Hogenesch and Eric A. Pierce.
Comparative Analysis of RNA-Seq Alignment Algorithms and the RNA-Seq Unified Mapper (RUM)
Bioinformatics. 2011 Sep 15;27(18):2518-28. Epub 2011 Jul 19.

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