Jul 122014
 

RSVP

:: DESCRIPTION

RSVP is a software package for prediction of alternative isoforms of protein-coding genes, based on both genomic DNA evidence and aligned RNA-seq reads.  The method is based on the use of ORF graphs, which are more general than the splice graphs used in traditional transcript assembly.

::DEVELOPER

Uwe Ohler’s Research Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C++ Compiler

:: DOWNLOAD

 RSVP

:: MORE INFORMATION

Citation

Improved transcript isoform discovery using ORF graphs.
Majoros WH, Lebeck N, Ohler U, Li S.
Bioinformatics. 2014 Apr 21.

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