Rseg allows the user to define sample-specific thresholds to call gains and losses in an interactive way. It also allows the user to correct for RMA induced normalization artifacts in case of imbalance between losses and gains.
Lamy P (firstname.lastname@example.org), Wiuf C, Ørntoft TF, Andersen CL.
- Windows/ Linux / MacOsX
- R package
:: MORE INFORMATION
Rseg–an R package to optimize segmentation of SNP array data.
Lamy P, Wiuf C, Ørntoft TF, Andersen CL.
Bioinformatics. 2011 Feb 1;27(3):419-20.