Feb 182016
 

RSEARCH 1.1

:: DESCRIPTION

RSEARCH aligns an RNA query to target sequences, using SCFG algorithms to score both secondary structure and primary sequence alignment simultaneously. It’s slow, but somewhat more capable of finding significant remote RNA structure homologies than sequence alignment methods like BLAST.

::DEVELOPER

Robbie Klein, Eddy lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C Compiler

:: DOWNLOAD

 RSEARCH

:: MORE INFORMATION

Citation

Robert J Klein and Sean R Eddy
RSEARCH: Finding homologs of single structured RNA sequences
BMC Bioinformatics 2003, 4:44

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