Oct 132013
 

RPOLY 1.2.1

:: DESCRIPTION

RPoly is a software to infer haplotypes from genotype data using the pure parsimony criterion, i.e., find the minimum number of haplotypes which explain a given set of genotypes. Rpoly is an efficient tool which uses pseudo-Boolean optimization to solve haplotype inference by pure parsimony.

::DEVELOPER

The Knowledge Discovery and Bioinformatics (KDBIO) group of INESC-ID

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows

:: DOWNLOAD

 RPoly

:: MORE INFORMATION

Citation

A. Graça, J. P. Marques-Silva, I. Lynce and A. Oliveira,
Efficient Haplotype Inference with Pseudo-Boolean Optimization,
Algebraic Biology 2007, July 2007.

A. Graça, J. P. Marques-Silva, I. Lynce and A. Oliveira,
Efficient Haplotype Inference with Combined CP and OR Techniques (Short Paper),
CPAIOR 2008, May 2008.

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