RNApyro – Detect and Correct Pyrosequencing Errors in Noncoding RNAs

RNApyro

:: DESCRIPTION

RNApyro is an efficient, linear time and space inside-outside algorithm that computes exact mutational probabilities under secondary structure and evolutionary constraints given as a multiple sequence alignment with a consensus structure.

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::DEVELOPER

Computer Science and Biology
 at McGill

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • Python

:: DOWNLOAD

 RNApyro

:: MORE INFORMATION

Citation:

J Comput Biol. 2013 Nov;20(11):905-19. doi: 10.1089/cmb.2013.0085. Epub 2013 Oct 17.
Using structural and evolutionary information to detect and correct pyrosequencing errors in noncoding RNAs.
Reinharz V1, Ponty Y, Waldispühl J.