Sep 262015
 

RNAMotif 3.1.1

:: DESCRIPTION

The rnamotif program searches a database for RNA sequences that match a “motif” describing secondary structure interactions. A match means that the given sequence is capable of adopting the given secondary structure, but is not intended to be predictive. Matches can be ranked by applying scoring rules that may provide finer distinctions than just matching to a profile.

::DEVELOPER

the Case group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Window with Cygwin / Linux / Mac OsX
  • C-compiler

:: DOWNLOAD

RNAMotif

:: MORE INFORMATION

Citation

T. Macke, D. Ecker, R. Gutell, D. Gautheret, D.A. Case and R. Sampath.
RNAMotif — A new RNA secondary structure definition and discovery algorithm.
Nucl. Acids Res. 29, 4724-4735 (2001).

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