RNAmutants 1.1.0

:: DESCRIPTION

RNAmutants is a web server to perform mutational analysis for a given RNA sequence. Previous methods relied on exhaustively enumerating k-point mutant sequences and subsequently applying mfold or RNAfold, a procedure with run time exponential in k. In contrast, RNAmutants computes the minimum free energy structure and Boltzmann partition function for all k-point mutants, for 0 ≤ k ≤ K, with run time O(K2n3).

::DEVELOPER

Clote Lab , Jerome Waldispühl

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux /  Mac OsX
• WebServer

:: DOWNLOAD

 RNAmutants 

:: MORE INFORMATION

Citation:

Jerome Waldispühl, Srinivas Devadas, Bonnie Berger, Peter Clote.
Efficient algorithms for probing the RNA mutation landscape.
PLoS Comput Biol. 2008 Aug 8;4(8):e1000124.