Ribostral (Ribonucleic Structural Aligner) is a user-friendly framework for analyzing, evaluating and viewing RNA sequence alignments with at least one available atomic resolution structure. It is the first of its kind that makes direct and easy- to-understand superposition of the isostericity matrices of basepairs observed in the structure onto sequence alignments, easily indicating allowed and unallowed substitutions at each BP position.
- Windows/ Linux / Mac OsX
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Bioinformatics. 2006 Sep 1;22(17):2168-70. Epub 2006 Jul 4.
Ribostral: an RNA 3D alignment analyzer and viewer based on basepair isostericities.
Mokdad A, Leontis NB.