Aug 262013
 

RefineHMM 1.0.0

:: DESCRIPTION

RefineHMM refines an original hidden Markov model (HMM) to find an optimal fit against the evolutionary group that the HMM models, and it does this using through iterative database searches and incremental subsequent adaptation of the seed set.

::DEVELOPER

IFM Bioinformatics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • Python
  • HMMER

:: DOWNLOAD

 RefineHMM

:: MORE INFORMATION

Citation

BMC Bioinformatics. 2010 Oct 27;11:534. doi: 10.1186/1471-2105-11-534.
Subdivision of the MDR superfamily of medium-chain dehydrogenases/reductases through iterative hidden Markov model refinement.
Hedlund J, Jörnvall H, Persson B.

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