REDseq includes functions to build restriction enzyme cut site (RECS) map, distribute mapped sequences on the map with five different approaches, find enriched/depleted RECSs for a sample, and identify differentially enriched/depleted RECSs between samples.
- R package
:: MORE INFORMATION
Zhu LJ, Chen PB and Fazzio TG.
REDseq: a Bioconductor Package for Analyzing Genome-Wide Restriction Endonuclease Accessibility Data.