May 062016
 

REDseq 1.18.0

:: DESCRIPTION

REDseq includes functions to build restriction enzyme cut site (RECS) map, distribute mapped sequences on the map with five different approaches, find enriched/depleted RECSs for a sample, and identify differentially enriched/depleted RECSs between samples.

::DEVELOPER

Program in Gene Function and Expression@umassmed

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • BioConductor
  • R package

:: DOWNLOAD

 REDseq

:: MORE INFORMATION

Citation:

Zhu LJ, Chen PB and Fazzio TG.
REDseq: a Bioconductor Package for Analyzing Genome-Wide Restriction Endonuclease Accessibility Data.
Bioinformatics (submitted)

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