Nov 182013
 

Recomb

:: DESCRIPTION

The program ms_recomb, a modified version of Richard Hudson’s ms, uses the coalescent to simulate genetic datasets with recombination rates that change through time.

The program msstats_recomb, an extensively modified version of Kevin Thornton’s msstats, implements n-tuple subsampling and calculates a suite of summary statistics with specific focus on recombination events

::DEVELOPER

Associate Professor Murray Cox, Massey University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C++ Compiler

:: DOWNLOAD

  Recomb

:: MORE INFORMATION

Citation:

Cox, M.P., B.R. Holland, M.C. Wilkins and J. Schmid. 2013.
Reconstructing Past Changes in Locus-Specific Recombination Rates.
BMC Genet. 2013 Feb 25;14:11. doi: 10.1186/1471-2156-14-11.

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