Jun 102015
 

RCARE

:: DESCRIPTION

RCARE searches, annotates and visualizes RNA editing sites using previously known thousands of editing sites.

RCARE conversion utilities is a set of python-based utilities which convert FASTQ and BAM(binary format for storing sequence data) into VCF(variant call format) and compare RNA to DNA VCF files which are derived from the same sample.

::DEVELOPER

SNUBI (Snubi’s Not Unics, Biomedical Informatics.)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

RCARE conversion utilities

:: MORE INFORMATION

Citation:

BMC Med Genomics. 2015 May 29;8 Suppl 2:S8. doi: 10.1186/1755-8794-8-S2-S8.
RCARE: RNA Sequence Comparison and Annotation for RNA Editing.
Lee S, Joung JG, Park C, Park J, Kim JH.

82 views

Sorry, the comment form is closed at this time.