RAPHAEL is a novel method for the detection of solenoids in protein structures. It reliably solves three problems of increasing difficulty: (1) recognition of solenoid domains, (2) determination of their periodicity and (3) assignment of insertions.
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Bioinformatics. 2012 Dec 15;28(24):3257-64. doi: 10.1093/bioinformatics/bts550. Epub 2012 Sep 8.
RAPHAEL: recognition, periodicity and insertion assignment of solenoid protein structures.
Walsh I1, Sirocco FG, Minervini G, Di Domenico T, Ferrari C, Tosatto SC.