Feb 282012
 

RankMotif++

:: DESCRIPTION

RankMotif++ is a software designed for finding motifs whenever sequences are associated with a semi-quantitative measure of protein-DNA-binding affinity. RankMotif++ learns motif models by maximizing the likelihood of a set of binding preferences under a probabilistic model of how sequence binding affinity translates into binding preference observations.

::DEVELOPER

Morris Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

  RankMotif++

:: MORE INFORMATION

Citation:

Xiaoyu Chen, Timothy R. Hughes & Quaid Morris (2007).
RankMotif++: a motif-search algorithm that accounts for relative ranks of K-mers in binding transcription factors“.
Bioinformatics 23(13):i72-i79.

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