QOD implements an original approach to multiple genome comparison. It segments a target genome with respect to its local similarities with k other reference genomes, and classifies its genomic regions according to two criteria:
- being shared or unshared across all genomes,
- offering a unique or several alignment possibilities.
- Windows / Linux / Mac OsX
:: MORE INFORMATION
“An Alternative Approach to Multiple Genome Comparison”
Mancheron A., Uricaru R., Rivals E.
Nucleic Acids Research 2011, vol. 39(15), p. e101.