Oct 172015
 

PTRcombiner 1.1

:: DESCRIPTION

PTRcombiner is a tool for the study of the combinatorial nature of post-transcriptional trans-factors. It allows the identification of clusters of trans-factors (RBPs and miRNAs) from interaction maps and it performs the biological characterization of identified clusters giving information about the overlap among the target genes, the GO enrichments and similarity among GO terms.

::DEVELOPER

Andrea Passerini

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ MacOsX / Windows
  • Python

:: DOWNLOAD

 PTRcombiner

:: MORE INFORMATION

Citation

PTRcombiner: mining combinatorial regulation of gene expression from post-transcriptional interaction maps.
Corrado G, Tebaldi T, Bertamini G, Costa F, Quattrone A, Viero G, Passerini A.
BMC Genomics. 2014 Apr 23;15:304. doi: 10.1186/1471-2164-15-304.

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