PSPE – Simulate Evolution of Non-coding DNA Sequences

PSPE

:: DESCRIPTION

PSPE (Phylogenetic Simulation of Promoter Evolution) is a computational tool specifically designed for simulating evolution of non-coding DNA sequences, in particular promoter sequences.

::DEVELOPER

Weichun Huang at Biostatistics Branch, the National Institute of Environmental Health Sciences (NIEHS), NIH

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 PSPE

:: MORE INFORMATION

Citation

Weichun Huang, Joseph R Nevins, and Uwe Ohler,
Phylogenetic simulation of promoter evolution: estimation and modelling of binding site turnover events and assessing their impact on alignment tools,
Genome Biology, Vol 8 (10) 2007