PSCN 1.0 – Parent-Specific Copy Number Estimation

PSCN 1.0

:: DESCRIPTION

PSCN segments the genome of a sample into homogeneous parts and gives an estimation of parent-specific DNA copy number using high-density SNP array data (logR and B-allele frequency). This package can be applied on platforms having both SNP probes and copy number probes.

::DEVELOPER

Hao Chen

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • R Package

:: DOWNLOAD

  PSCN

:: MORE INFORMATION

Citation

Chen, H., Xing, H. and Zhang, N.R., 2011,
Stochastic segmentation models for allele-specific copy number estimation with SNP-array data,
PLoS Computational Biology, 7, e1001060.

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